Information for 11-CCCTTAAGTTCAM (Motif 18)

A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T A C T G G T C A C G T A A G T C A G C T A G C T C G T A C G T A A C T G A C T G C T A G
p-value:1e-9
log p-value:-2.127e+01
Information Content per bp:1.834
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.8 +/- 24.6bp
Average Position of motif in Background49.6 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTTAAGTTCAM
-----AAGGTCAC
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCCTTAAGTTCAM
---TCAAGGTCAN
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCTTAAGTTCAM-
---TCAAGGTCATA
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCTTAAGTTCAM
---TCAAGGTCAT
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCCTTAAGTTCAM---
TCTCAAAGGTCACCTG
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

ELF1/MA0473.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAAGTTCAM
AACCCGGAAGTG---
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
C G T A G C T A G T A C T A G C G T A C A C T G A C T G C T G A G C T A C T A G G A C T T C A G A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCTTAAGTTCAM
AACCCGGAAGTG---
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCTTAAGTTCAM---
GGCAAAAGTCCAATAA
 A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Vdr/MA0693.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCCTTAAGTTCAM
GAGTTCATTGAGTTCA-
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
T C A G T C G A C A T G A C G T A C G T A G T C C T G A G A C T G A C T T C A G T C G A C T A G A C G T A C G T A G T C C T G A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTAAGTTCAM
NSCACTYVAV-----
 A C G T A C G T A G T C A G T C A G T C A C G T A C G T C T G A C T G A C T A G A C G T A C G T A G T C G T C A G T A C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T