Information for 2-GTGGAGACGCGAGTGG (Motif 12)

A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A T A G C A G C T A T G C A C T G A G T C A T C G A C G T A G T C A C G T A G T C A G T C C G T A A G T C
p-value:1e-10
log p-value:-2.368e+01
Information Content per bp:1.909
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.2 +/- 17.8bp
Average Position of motif in Background52.8 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTGGAGACGCGAGTGG
CTACTTGGATACGGAAT---
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGGAGACGCGAGTGG
GTGGAT----------
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GTGGAGACGCGAGTGG
NAGNTCTCGCGAGAN-
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.48
Offset:1
Orientation:forward strand
Alignment:GTGGAGACGCGAGTGG
-GTGCCACGCGACTG-
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAGACGCGAGTGG
AATGGAAAAT-------
 A C G T A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAGACGCGAGTGG
TGTCTAGACG-------
 A C G T A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:GTGGAGACGCGAGTGG
-TGGAAAA--------
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:GTGGAGACGCGAGTGG
--AGAAACGAAAGT--
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:GTGGAGACGCGAGTGG-
--NNNACCGAGAGTNNN
 A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G A C G T
A C G T A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:10
Score:0.46
Offset:-8
Orientation:forward strand
Alignment:--------GTGGAGACGCGAGTGG
ACTGACCCTTGGTTACCACAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G C G T A C T A G G T C A A T G C A C T G G T A C A T C G C T G A A T C G C G A T A C T G A C T G
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G A C G T