Information for 6-ACATYCTGCTTTGAAT (Motif 6)

G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T
Reverse Opposite:
G T C A A C G T C G A T A G T C C G T A C G T A C G T A A C T G T G A C C G T A A C T G T C A G G T C A A C G T C A T G A C G T
p-value:1e-14
log p-value:-3.245e+01
Information Content per bp:1.719
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 28.5bp
Average Position of motif in Background46.5 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT-
-------CCTTTGATGT
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT--
---NANTTCATTGAATTA
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.57
Offset:9
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT---
---------TTTGAAACCG
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT---
-----TNCCTTTGATCTTN
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACATYCTGCTTTGAAT
ACATCCTGNT------
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT----
---NNTTCCTTTGATCTANA
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT----
---NNTTCCTTTGATCTNNA
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT
-CCCCCTGCTGTG---
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACATYCTGCTTTGAAT
-NNTCCTGCTGTGNNN
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACATYCTGCTTTGAAT
-----CTTCTGGGAAA
 G T C A G T A C T C G A A C G T A G T C G T A C A C G T A C T G A G T C C G A T G A C T A C G T T A C G C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A