Information for 15-CCTGTGCTAA (Motif 35)

T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A
Reverse Opposite:
A C G T A C G T C T G A A T C G A G T C C T G A A T G C C G T A C T A G A C T G
p-value:1e-6
log p-value:-1.534e+01
Information Content per bp:1.749
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif265.5
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets51.2 +/- 26.5bp
Average Position of motif in Background45.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTGTGCTAA---
TTATGTACTAATAA
 A C G T T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0081.1_Pdx1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTGTGCTAA-------
-NTGNGCTAATTACCNN
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCTGTGCTAA-----
-----GCTAATTGCT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTGTGCTAA--
--GGTGCCAAGT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PH0036.1_Gsx2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTGTGCTAA-------
-NTNNGCTAATTANCNT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTGTGCTAA-------
-CTGAGCTAATTACCGT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

POU3F4/MA0789.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTGTGCTAA-
--TATGCAAAT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCTGTGCTAA----
------CTAATKGV
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGTGCTAA-------
-NTGAGCTAATTACCNT
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T

PH0103.1_Meox1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGTGCTAA-------
-CTGAGGTAATTACCNC
 T G A C G A T C C G A T A T C G G A C T C T A G A T G C A G C T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C