Information for 21-GTCCCTTTAAGAG (Motif 30)

C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G
Reverse Opposite:
G A T C C A G T A G T C C A G T G A C T C G T A C T G A C G T A A C T G A T C G T A C G C T G A A G T C
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.675
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif147.0
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets47.4 +/- 30.4bp
Average Position of motif in Background52.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GTCCCTTTAAGAG--
---CCTTTTATAGNC
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG--
-TNCCTTTGATCTTN
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG
---CCTTTGATGT
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG
-TNCCTTTGATGT
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCCTTTAAGAG---
AATCCCTTTGATCTATC
 A C G T C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTTTAAGAG---
NNTTCCTTTGATCTNNA
 A C G T C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG--
-----TTTAATTGCN
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCCTTTAAGAG---
NNTTCCTTTGATCTANA
 A C G T C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG--
------TTAAGTGGN
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GTCCCTTTAAGAG---
------TTGAGTGSTT
 C T A G A G C T A T G C T A G C A G T C A C G T A G C T C G A T C T G A G C T A T C A G G C T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T