Information for 20-GGCWGTYGTTCAR (Motif 29)

C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A A T G C C T A G C T G A A G T C C G A T A C T G A G T C G A T C
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.3 +/- 27.1bp
Average Position of motif in Background55.0 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGCWGTYGTTCAR
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCWGTYGTTCAR
GSCTGTCACTCA-
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCWGTYGTTCAR
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCWGTYGTTCAR
GGCVGTTR-----
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCWGTYGTTCAR
-NCTGTCAATCAN
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCWGTYGTTCAR
TGGCAGTTGG----
 A C G T C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCWGTYGTTCAR
AGCAGCTGCT---
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGCWGTYGTTCAR
-GCTGTGGTTT--
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCWGTYGTTCAR
-SCTGTCAVTCAV
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MYF6/MA0667.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCWGTYGTTCAR
AACAGCTGTT---
 C A T G A C T G A G T C C G T A A C T G A G C T G A T C A T C G A C G T A C G T A G T C C G T A C T A G
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T