Information for 18-TCAGAGTATACCTTCT (Motif 28)

A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A T A C G C G T A G T C A C T A G C T A G C G A T C G T A A C G T C G T A A G T C C G A T A G T C A C G T A C T G C G T A
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.891
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 19.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGTATACCTTCT
NNNTTTGTTTACATTTN
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGTATACCTTCT
NNNTTTGTTTACATTTN
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.45
Offset:-1
Orientation:reverse strand
Alignment:-TCAGAGTATACCTTCT
TTCNAAGTACTTNNNNN
 A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.45
Offset:1
Orientation:reverse strand
Alignment:TCAGAGTATACCTTCT
-CTTTGTTTACTTTTN
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Mafb/MA0117.2/Jaspar

Match Rank:5
Score:0.44
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGTATACCTTCT
NGTCAGCANTTT------
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.44
Offset:-2
Orientation:reverse strand
Alignment:--TCAGAGTATACCTTCT
GVACAGNMTGTYCTB---
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:TCAGAGTATACCTTCT
---GAATATTCAT---
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.44
Offset:4
Orientation:reverse strand
Alignment:TCAGAGTATACCTTCT
----TGTTTACTTT--
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:TCAGAGTATACCTTCT-
---CAGTTTCGNTTCTN
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.44
Offset:2
Orientation:reverse strand
Alignment:TCAGAGTATACCTTCT
--NTTGTTTACGTTNN
 A C G T A G T C C G T A A C T G C G T A A C T G A C G T G T C A A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C G T
A C G T A C G T G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G