Information for 16-TATTATTAGAGASWWG (Motif 23)

A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
Reverse Opposite:
A G T C C G T A C G A T A T C G C G A T A T G C A G C T A T G C A G C T C G T A G T C A C G A T T C G A C G T A C G A T C T G A
p-value:1e-9
log p-value:-2.289e+01
Information Content per bp:1.747
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 12.8bp
Average Position of motif in Background39.7 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATTATTAGAGASWWG
AATATTAATAAAGA----
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGAGASWWG
TCTATTTTTAGA------
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGAGASWWG
TCTATTTATAGN------
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGAGASWWG
GCTATTTATAGC------
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TATTATTAGAGASWWG
KCTATTTTTRGH------
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATTATTAGAGASWWG
CCGTATTATAAACAA-
 A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TATTATTAGAGASWWG
NTTTTATTGG-------
 A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TATTATTAGAGASWWG
GCTATTTTTAGC------
 A C G T A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TATTATTAGAGASWWG
TTTTTATTGG-------
 A C G T A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TATTATTAGAGASWWG
TTTTATTRGN------
 A G C T C G T A C G A T A G C T C G T A A C G T A C G T C T G A T A C G C T G A A T C G C G T A A T G C C G T A C G A T A C T G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T A C G T A C G T A C G T