Information for 13-CCAGGGRAACCAACCR (Motif 20)

G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
Reverse Opposite:
A G T C A C T G A C T G A G C T A G C T C T A G A C T G C G A T A C G T A G C T A G T C A G T C G T A C A C G T A T C G A C T G
p-value:1e-10
log p-value:-2.416e+01
Information Content per bp:1.725
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 22.6bp
Average Position of motif in Background60.8 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGGRAACCAACCR
TTGCCATGGCAACC-----
 A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGGRAACCAACCR
TTGCCATGGCAACN-----
 A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGRAACCAACCR
GTTGCCATGGCAAC------
 A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCAGGGRAACCAACCR
GTTGCCATGGCAACCG----
 A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGRAACCAACCR
GTTGCCATGGCAACM-----
 A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T A C G T A C G T A C G T A C G T

RFX3/MA0798.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGGRAACCAACCR
CGTTGCCATGGCAACG-----
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G A C G T A C G T A C G T A C G T A C G T

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGGGRAACCAACCR
NGTTGCCATGGCAACG-----
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G A C G T A C G T A C G T A C G T A C G T

RFX2/MA0600.2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGGGRAACCAACCR
CGTTGCCATGGCAACG-----
 A C G T A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGRAACCAACCR
TACCATAGCAACGGT---
 A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAGGGRAACCAACCR
GTCCCCAGGGGA--------
 A C G T A C G T A C G T A C G T G T A C A T G C G T C A A C T G T A C G C T A G T C G A C G T A C G T A T G A C A G T C C T G A C T G A G T A C T G A C T C A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T