Information for 4-GCTCTCATTGGCT (Motif 2)

T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
Reverse Opposite:
C T G A C T A G A G T C A G T C G T C A G T C A G A C T T C A G T C G A A C T G G C T A C A T G A G T C
p-value:1e-22
log p-value:-5.098e+01
Information Content per bp:1.776
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.3 +/- 22.2bp
Average Position of motif in Background40.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GCTCTCATTGGCT
---CCGATTGGCT
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:GCTCTCATTGGCT---
----TGATTGGCTANN
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GCTCTCATTGGCT-----
---CTGATTGGTCNATTT
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCTCTCATTGGCT--
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.65
Offset:7
Orientation:forward strand
Alignment:GCTCTCATTGGCT
-------TTGGCA
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GCTCTCATTGGCT--
------NTTGGCANN
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTCTCATTGGCT---
TGTTCCCATTGTGTACT
 A C G T T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTCTCATTGGCT
---CTCATTGTC-
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCTCTCATTGGCT--
-------TWGTCTGV
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTCTCATTGGCT---
GNNTTAATTGGTTGTT
 T C A G G T A C C G A T G T A C A G C T A G T C C G T A A C G T A C G T A C T G A C T G A G T C A G C T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T