Information for 13-AGGCTCYCAGCMK (Motif 14)

G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C A C G T T A C G C T G A T A C G C G T A C T A G G T A C A T G C A C G T
p-value:1e-11
log p-value:-2.642e+01
Information Content per bp:1.697
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.50%
Number of Background Sequences with motif89.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets40.1 +/- 24.2bp
Average Position of motif in Background51.1 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCTCYCAGCMK
-NGCTN-------
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCTCYCAGCMK
--GCTCCG-----
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGCTCYCAGCMK-
--SCTGTCARCACC
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G A C G T
A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGCTCYCAGCMK
-VGCTGWCAVB--
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGGCTCYCAGCMK-
----DCTCAGCAGG
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCTCYCAGCMK
AGGGTAACAGC--
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGCTCYCAGCMK----
--CCACACAGCAGGAGA
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGCTCYCAGCMK----
--CCACACAGCAGGAGA
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGGCTCYCAGCMK
TWGTCTGV------
 A C G T G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGCTCYCAGCMK
TGTCTGDCACCT-
 G T C A A T C G A C T G A G T C A C G T A T G C A G C T A T G C G T C A A C T G T G A C G T C A A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T