Information for 7-ATTTGGCTGCCYCTTT (Motif 11)

C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
Reverse Opposite:
C T G A C G T A C G T A A C T G T C A G A T C G A T C G A G T C G T C A A C T G A G T C A G T C C G T A C G T A C G T A G A C T
p-value:1e-12
log p-value:-2.830e+01
Information Content per bp:1.748
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 17.8bp
Average Position of motif in Background52.6 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATTTGGCTGCCYCTTT
--TTGGCA--------
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATTTGGCTGCCYCTTT
--TWGTCTGV------
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGGCTGCCYCTTT
NNATTGACAGGTGCTT-
 A C G T C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCTGCCYCTTT
-CTTGAGTGGCT----
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGGCTGCCYCTTT
ATTTTNGGGGGGCNN---
 A C G T A C G T C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ATTTGGCTGCCYCTTT
---TGTCTGDCACCT-
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:ATTTGGCTGCCYCTTT
--TTGATTGN------
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGGCTGCCYCTTT
NNNNTTGTGTGCTTNN--
 A C G T A C G T C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--ATTTGGCTGCCYCTTT
CAAGATGGCGGC------
 A C G T A C G T C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:ATTTGGCTGCCYCTTT
-NTTGGCANN------
 C T G A C G A T C G A T A C G T A C T G C T A G A G T C A C G T A C T G A T G C A T G C A G T C T G A C A C G T G C A T A G C T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T