Information for 10-SGTTTATTGGACA (Motif 10)

A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
Reverse Opposite:
A C G T A C T G C A G T A G T C A G T C G T C A C G T A A C G T T G C A T C G A C T G A A T G C T A C G
p-value:1e-12
log p-value:-2.830e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.2 +/- 17.4bp
Average Position of motif in Background20.3 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:SGTTTATTGGACA
NTTTTATTGG---
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SGTTTATTGGACA
TTTTTATTGG---
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:SGTTTATTGGACA--
---TGATTGGCTANN
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SGTTTATTGGACA
NTTTTATTGG---
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:SGTTTATTGGACA
-TTTTATTRGN--
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:SGTTTATTGGACA
--CCGATTGGCT-
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:SGTTTATTGGACA----
--CTGATTGGTCNATTT
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:SGTTTATTGGACA-----
--NNNNTTGGGCACNNCN
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SGTTTATTGGACA
-TTTTATKRGG--
 A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---SGTTTATTGGACA
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A T G C T A C G A G C T A C G T A C G T G T C A A C G T A C G T A C T G C T A G G C T A G T A C C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T