Information for 2-TGCACAGCCT (Motif 4)

A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G G T A C A G C T A T C G C G A T A C T G G T A C G T C A
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.837
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif172.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets57.4 +/- 29.1bp
Average Position of motif in Background46.2 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0026.1_Gm397_1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TGCACAGCCT-
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCACAGCCT
TGCCCAGNHW
 A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCACAGCCT
--CACAGN--
 A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCACAGCCT----
GAGCACAGCAGGACA
 A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCACAGCCT-
-GCTCGGSCTC
 A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGCACAGCCT
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGCACAGCCT
----CAGCC-
 A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCACAGCCT---
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCACAGCCT----
CCACACAGCAGGAGA
 A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------TGCACAGCCT--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C G C T A A T G C C T G A A C T G G T A C G T A C C G A T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G