Information for 6-AATTCAGGTGTGAAGT (Motif 9)

C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
Reverse Opposite:
C G T A A G T C G A C T A G C T A G T C C T G A A T G C G T C A A G T C G A T C A G C T C A T G G T C A C G T A A C G T A C G T
p-value:1e-12
log p-value:-2.798e+01
Information Content per bp:1.705
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.1 +/- 24.6bp
Average Position of motif in Background62.9 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AATTCAGGTGTGAAGT
AATTAGTG--------
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATTCAGGTGTGAAGT
AANTCATGCGTGAA--
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AATTCAGGTGTGAAGT
GGACTGAATTCATGCC------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AATTCAGGTGTGAAGT
----TAGGTGTGAAG-
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATTCAGGTGTGAAGT
AAATTCAAGTGGNTTN-
 A C G T C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AATTCAGGTGTGAAGT
-----AGGTGTGA---
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AATTCAGGTGTGAAGT
-----AGGTGTGAAA-
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AATTCAGGTGTGAAGT
-----AGGTGTGA---
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AATTCAGGTGTGAAGT
----CAGGTGAGG---
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AATTCAGGTGTGAAGT
-----AGGTGTGA---
 C G T A G T C A C G A T C A G T G A T C T C G A C T A G A C T G A C G T A T C G G A C T T A C G C T G A C T G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T