Information for 2-TGTACTTTGA (Motif 8)

A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A
Reverse Opposite:
C G A T A G T C C G T A G T C A C G T A A C T G A G C T G T C A G A T C C G T A
p-value:1e-12
log p-value:-2.928e+01
Information Content per bp:1.824
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.82%
Number of Background Sequences with motif325.7
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets51.7 +/- 23.3bp
Average Position of motif in Background47.0 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGTACTTTGA------
TGGACTTTGNNCTNTG
 A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGTACTTTGA----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGTACTTTGA-----
TGGACTTTGNNCTCN
 A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TGTACTTTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTTTGA
CTGACCTTTG-
 A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTTTGA------
NNTTCCTTTGATCTANA
 A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTACTTTGA----
TGACCTTTGACCCC
 A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTACTTTGA------
ATTTCCTTTGATCTATA
 A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTACTTTGA------
NNTTCCTTTGATCTNNA
 A C G T A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTACTTTGA----
TGACCTTTGACCCC
 A C G T C T A G C A G T T C G A G T A C A C G T C A G T C G A T T C A G G C T A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C