Information for 9-TKACCTTGTT (Motif 45)

C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
Reverse Opposite:
G C T A T G C A G T A C C G T A G C T A C T A G C A T G G C A T T G A C G C T A
p-value:1e-2
log p-value:-6.719e+00
Information Content per bp:1.601
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.89%
Number of Background Sequences with motif670.6
Percentage of Background Sequences with motif1.39%
Average Position of motif in Targets42.6 +/- 25.8bp
Average Position of motif in Background50.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA/MA0071.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TKACCTTGTT
TGACCTTGAT
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:TKACCTTGTT
----ATTGTT
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TKACCTTGTT
BNTGDCCTTG--
 A C G T A C G T C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TKACCTTGTT
ATGACCTTGA-
 A C G T C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TKACCTTGTT
TGACCTARTT
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TKACCTTGTT
NTGACCTTGA-
 A C G T C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TKACCTTGTT---
----ATTGTTTAN
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TKACCTTGTT-
----ATTGTTA
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TKACCTTGTT
---CTTTGT-
 C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TKACCTTGTT--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A G T A C G A T C C G A T G C A T C A T G A C G T C G A T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A