Information for 2-ASACCCTGAMCTATAA (Motif 6)

C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T T G C A G A C T C G T A A C T G A C T G A C G T G A T C C G T A A C T G A C T G A C T G A G C T A T C G A G C T
p-value:1e-11
log p-value:-2.534e+01
Information Content per bp:1.789
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.4 +/- 28.6bp
Average Position of motif in Background68.8 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
TGACCTTGACCT----
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
TGACCTTGACCT----
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
------TGACCTTGAT
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
-----ATGACCTTGAA
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ASACCCTGAMCTATAA
-----NTGACCTTGA-
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
--NNACTTACCTN---
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA---
----GCTGACCTTGAACTN
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
------TGACCT----
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ASACCCTGAMCTATAA
AAGACCCYYN-------
 A C G T C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ASACCCTGAMCTATAA
-----CTGACCTTTG-
 C T G A T A G C T C G A A G T C A G T C A G T C A C G T C A T G G T C A G T A C A G T C A C G T C G T A A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T