Information for 9-CYRAAGGSTTCYC (Motif 19)

A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
Reverse Opposite:
A T C G C T G A A C T G C G T A C G T A A T C G A G T C A G T C A G C T A C G T A G T C C T A G A C T G
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.5 +/- 17.4bp
Average Position of motif in Background47.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CYRAAGGSTTCYC
------GCTTCC-
 A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CYRAAGGSTTCYC
GGCACCCAGGGGTGC--
 A C G T A C G T A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CYRAAGGSTTCYC---
-CAAAGGCGTGGCCAG
 A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C A C G T A C G T A C G T
A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PROX1/MA0794.1/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CYRAAGGSTTCYC-
--TAAGGCGTCTTG
 A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C A C G T
A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CYRAAGGSTTCYC-----
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CYRAAGGSTTCYC
AGCCTCAGGCA----
 A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CYRAAGGSTTCYC
TTCTAGAABNTTCTA
 A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CYRAAGGSTTCYC
TTGCCCTAGGGCAT---
 A C G T A C G T A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CYRAAGGSTTCYC---
------HTTTCCCASG
 A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CYRAAGGSTTCYC
AGCCTCAGGCA----
 A C G T A C G T A G T C G A T C C T A G C G T A C T G A A C T G A C T G A T G C A C G T A C G T A G T C A G C T A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T