Information for 7-NTCTATAAAN (Motif 14)

T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G
Reverse Opposite:
G A T C A C G T C A G T C A G T T C G A G A C T C T G A A T C G T G C A A T G C
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.402
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif197.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets51.4 +/- 27.4bp
Average Position of motif in Background52.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:NTCTATAAAN--
NGYCATAAAWCH
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--NTCTATAAAN----
CTACCAATAAAATTCT
 A C G T A C G T T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:NTCTATAAAN-
-CCAATAAAAC
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NTCTATAAAN
NGCAATTAAA
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NTCTATAAAN
-GCAATAAAA
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NTCTATAAAN-
-CCAATAAAAA
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-NTCTATAAAN
AAGCCATAAAA
 A C G T T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:NTCTATAAAN---
-TCTAAAAATAGA
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T A C G T A C G T
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:NTCTATAAAN-------
--GTATAAAAGGCGGGG
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:NTCTATAAAN-------
--GTATAAAAGGCGGGG
 T A C G A C G T T A G C G A C T C T G A A C G T G T C A G T C A T G C A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G