Information for 5-ATTGACTAAGGGC (Motif 7)

C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
Reverse Opposite:
C A T G G T A C A G T C A G T C A G C T A C G T C G T A C T A G C G A T A G T C C T G A C G T A G C A T
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.809
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.9 +/- 25.0bp
Average Position of motif in Background61.4 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0173.1_Uncx/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTGACTAAGGGC
CATAATTAATTAACGCG
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
T G A C C T G A G C A T C T G A T G C A A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A G T C T A C G T A G C A C T G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGACTAAGGGC
TAATTGATTA-----
 A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTGACTAAGGGC
TGTAATTAATTATGG--
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:ATTGACTAAGGGC
-----CTAATKGV
 C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTGACTAAGGGC
NTATCGATTA-----
 A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T A C G T A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTGACTAAGGGC
NNNAATTAATTAANGNG
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
A C T G G A T C G A T C T C G A T C G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A G A C T C A T G A G T C T C A G

PH0153.1_Prop1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTGACTAAGGGC-
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

PH0159.1_Rhox6/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATTGACTAAGGGC
NNGCATTAATTAANGCA
 A C G T A C G T A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C T A G C G T A A T C G T G A C T C G A G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A C T G C A T G A G T C C G T A

CUX2/MA0755.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTGACTAAGGGC
TTATCGATTA-----
 A C G T A C G T C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTGACTAAGGGC
ATTGATTYND---
 C G T A A C G T A G C T C T A G C G T A G A T C C G A T C G T A C T G A A C T G A C T G A C T G G T A C
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T