Information for 2-GTACTTTGCC (Motif 5)

A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C
Reverse Opposite:
C T A G T A C G G T A C G T C A T C G A G C T A T C A G C A G T C T G A T A G C
p-value:1e-12
log p-value:-2.785e+01
Information Content per bp:1.659
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.95%
Number of Background Sequences with motif859.7
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets43.0 +/- 27.4bp
Average Position of motif in Background51.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGCC----
TGGACTTTGNNCTCN
 A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGCC-----
TGGACTTTGNNCTNTG
 A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GTACTTTGCC---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------GTACTTTGCC
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGCC---
TGACCTTTGCCCTA
 A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTACTTTGCC-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTACTTTGCC---
TGACCTTTGCCCCA
 A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTACTTTGCC----
TGACCTTTGCCCTAN
 A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GTACTTTGCC
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTACTTTGCC
CTGACCTTTG--
 A C G T A C G T A T C G G A C T G T C A A G T C C G A T A G C T C A G T C A T G A T G C G A T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T