Information for 4-AAAATCTGAAAGCCAA (Motif 12)

C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C T A G A G T C A C G T A G C T A C G T A G T C C G T A C T A G C G T A C G A T A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.843e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 27.5bp
Average Position of motif in Background49.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAATCTGAAAGCCAA-
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA
----ACTGAAACCA--
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA
-GAAAGTGAAAGT---
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA
-------AAAAGTCAA
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAAATCTGAAAGCCAA
BAGTCATANTGAAAG----
 A C G T A C G T A C G T C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA
-GAAASYGAAASY---
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA
AGAAAGTGAAAGTGA-
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAAATCTGAAAGCCAA
----TTTGAAACCG--
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AAAATCTGAAAGCCAA---
-----ACGAAAGCGAAAGT
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:AAAATCTGAAAGCCAA
----------TGCCAA
 C G T A G T C A C G T A C G T A A C G T A G T C A C G T A C T G C G T A C T G A C G T A C T A G A G T C G T A C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A