Information for 5-HTTCCCMGRR (Motif 9)

G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A
Reverse Opposite:
A G C T G A C T A T G C C A G T C T A G C T A G A C T G C G T A T G C A C T G A
p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.483
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.21%
Number of Background Sequences with motif633.7
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets47.8 +/- 29.3bp
Average Position of motif in Background48.9 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-HTTCCCMGRR
HTTTCCCASG-
 A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

STAT3/MA0144.2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:HTTCCCMGRR-
TTTCCCAGAAN
 G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:HTTCCCMGRR-
TTTCCTGGAAA
 G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-HTTCCCMGRR
ATTTCCAAGAA
 A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---HTTCCCMGRR-
NNNTTTCCTGGAAA
 A C G T A C G T A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-HTTCCCMGRR----
ATTTCCCAGVAKSCY
 A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:HTTCCCMGRR
--TCCCCA--
 G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-HTTCCCMGRR-
NTTTCTNAGAAA
 A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---HTTCCCMGRR---
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T A C G T A C G T
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--HTTCCCMGRR--
NATTTCCNGGAAAT
 A C G T A C G T G A C T A C G T G C A T T G A C G A T C G A T C G T C A T A C G C T G A T C G A A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T