Information for 3-CAGCWGCCTMAAACAG (Motif 9)

A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
Reverse Opposite:
G T A C C A G T C A T G G C A T C G A T C A G T A C G T C G T A A C T G A C T G A T G C C G A T A C T G G T A C C G A T A T C G
p-value:1e-9
log p-value:-2.104e+01
Information Content per bp:1.684
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif45.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets62.8 +/- 23.8bp
Average Position of motif in Background51.7 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGCWGCCTMAAACAG
CAGCTGNT--------
 A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGCWGCCTMAAACAG
NNGCAGCTGTC--------
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCWGCCTMAAACAG
AGCAGCTGCTNN------
 A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCWGCCTMAAACAG
AGCAGCTGCT--------
 A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGCWGCCTMAAACAG
NNACAGCTGC---------
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAGCWGCCTMAAACAG
NNVVCAGCTGBN--------
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGCWGCCTMAAACAG
NCAGCTGCTG-------
 A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGCWGCCTMAAACAG
NNGCAGCTGTT--------
 A C G T A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCWGCCTMAAACAG
CGCAGCTGCG--------
 A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCWGCCTMAAACAG
TGCAGCTGTCCCT-----
 A C G T A C G T A T G C C G T A A C T G G T A C C G T A A T C G G T A C A G T C G C A T T G C A G T C A C G T A C G T A G T A C G C T A A C T G
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T