Information for 1-CAACGCTGTG (Motif 1)

T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G
Reverse Opposite:
T A G C T C G A T G A C C T G A A T C G T G A C A C T G C A G T G C A T A T C G
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.670
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif5.85%
Number of Background Sequences with motif835.6
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets52.9 +/- 27.9bp
Average Position of motif in Background51.2 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CAACGCTGTG
----GCTGTG
 T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAACGCTGTG----
----GCTGTGGTTT
 T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACGCTGTG------
AGGACGCTGTAAAGGGA
 A C G T T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACGCTGTG------
AAGACGCTGTAAAGCGA
 A C G T T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACGCTGTG------
AAGACGCTGTAAAGCGA
 A C G T T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAACGCTGTG---
NNTCCTGCTGTGNNN
 A C G T A C G T T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAACGCTGTG
---NGCTN--
 T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAACGCTGTG----
---GTCTGTGGTTT
 T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAACGCTGTG-
-CCTGCTGAGH
 T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAACGCTGTG
GACCCCCCGCTGTG
 A C G T A C G T A C G T A C G T T A G C C G T A G T C A G T A C A C T G T A G C G A C T A C T G A G C T A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G