Information for 5-GCCTCCTGAAGCC (Motif 9)

T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
Reverse Opposite:
A C T G T A C G T G A C G C A T A G C T T A G C C G T A A C T G T A C G C T G A T C A G T A C G A T G C
p-value:1e-21
log p-value:-5.042e+01
Information Content per bp:1.690
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets47.5 +/- 24.2bp
Average Position of motif in Background65.1 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GCCTCCTGAAGCC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCTCCTGAAGCC
-GRTGMTRGAGCC
 T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCTCCTGAAGCC--
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCTGAAGCC-
GGCCYCCTGCTGDGH
 A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCTCCTGAAGCC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCTCCTGAAGCC--
-CCCCCTTGGGCCCC
 T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C A C G T A C G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCCTCCTGAAGCC
ACATCCTGNT---
 T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCCTGAAGCC
CCCCCTGCTGTG---
 A C G T A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCTGAAGCC-
GACCCCCCGCTGTGC
 A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCCTGAAGCC
CACTTCCTGT----
 A C G T T A C G A T G C A G T C A G C T A T G C G T A C G C A T A T C G T C G A C G T A A C T G A T G C A G T C
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T