Information for 23-CAAATTAATA (Motif 36)

T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A
Reverse Opposite:
C A G T C G T A G C A T C A G T C G T A G C T A A G C T C G A T A C G T A C T G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.663
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets59.7 +/- 24.0bp
Average Position of motif in Background24.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3b/MA0601.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAAATTAATA-
NTAATTAATAT
 T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAAATTAATA--
AAAAAATCAATAAT
 A C G T A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAAATTAATA--
AAAAAATCGATAAT
 A C G T A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

PH0172.1_Tlx2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CAAATTAATA----
TAATTAATTAATAACTA
 A C G T A C G T A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CAAATTAATA
--AATTATT-
 T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PH0135.1_Phox2a/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CAAATTAATA---
NNACTAATTAATNNNN
 A C G T A C G T A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAAATTAATA--
AAAAAATCGATAAT
 A C G T A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

mix-a/MA0621.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAAATTAATA
NCTAATTAANN
 A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAAATTAATA
GCCAATTAAC-
 A C G T T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAATTAATA----
-AAATTAATTAATC
 T G A C T G C A C G T A C T G A C A G T G C A T G T C A C G T A C G A T G T C A A C G T A C G T A C G T A C G T
A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C