Information for 19-CTGCGCAGAC (Motif 34)

A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C
Reverse Opposite:
T A C G A G C T T A G C G A C T A T C G A T G C T C A G A G T C G T C A T A C G
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.686
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets45.6 +/- 24.8bp
Average Position of motif in Background50.9 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGCGCAGAC-
-TGCCCAGNHW
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGCGCAGAC--
-TGCGCAGGCGC
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGCGCAGAC--
CTGCGCATGCGC
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC----
----CCAGACRSVB
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC--
----CCAGACAG
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGCGCAGAC--
----BCAGACWA
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCGCAGAC--
GTGCGCATGCGC
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGCGCAGAC
GCTGTG-----
 A C G T A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGCGCAGAC-
-TGTCTAGACG
 A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGCGCAGAC------
CAAATCCAGACATCACA
 A C G T A G T C C A G T T A C G A G T C T A C G T A G C C G T A A T C G T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A