p-value: | 1e-11 |
log p-value: | -2.602e+01 |
Information Content per bp: | 1.446 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 1.61% |
Number of Background Sequences with motif | 2.9 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 43.2 +/- 21.2bp |
Average Position of motif in Background | 53.6 +/- 22.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GAGAGGCCTT- ---AGGCCTNG |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GAGAGGCCTT- ---AGGCCTAG |
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PROX1/MA0794.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGAGGCCTT- CAAGACGCCTTA |
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Zfx/MA0146.2/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGAGGCCTT------ --CAGGCCNNGGCCNN |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGAGGCCTT CTTGAGTGGCT-- |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GAGAGGCCTT TTGAGTGSTT-- |
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Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GAGAGGCCTT--- ---TGACCTTGAN |
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PB0180.1_Sp4_2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGAGGCCTT-- NNGGCCACGCCTTTN |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GAGAGGCCTT- -BNTGDCCTTG |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GAGAGGCCTT BTBRAGTGSN--- |
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