Information for 13-CWTTTRTAAG (Motif 22)

A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G
Reverse Opposite:
A G T C A G C T A G C T G C T A A G C T C G T A C G T A C G T A C G T A A C T G
p-value:1e-15
log p-value:-3.481e+01
Information Content per bp:1.842
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.9 +/- 28.8bp
Average Position of motif in Background81.9 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CWTTTRTAAG-
-TTTTATKRGG
 A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CWTTTRTAAG-
-TTTTATTRGN
 A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T
A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CWTTTRTAAG
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CWTTTRTAAG
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CWTTTRTAAG-
GNCTATAAAAGG
 A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CWTTTRTAAG
CTATTTTTGG
 A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Nkx2-5/MA0063.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CWTTTRTAAG
CAATTAA---
 A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CWTTTRTAAG-
GCTATTTATAGC
 A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CWTTTRTAAG----
NAATTTTACGAGNTNN
 A C G T A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CWTTTRTAAG-
TCTATTTATAGN
 A C G T A G T C C G A T C G A T A C G T A C G T C T G A C G A T C T G A C T G A A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T