Information for 12-GTTTTWMARG (Motif 21)

T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
Reverse Opposite:
A G T C A G T C C G A T A C G T G C A T G C T A C G T A G T C A G T C A A T G C
p-value:1e-15
log p-value:-3.481e+01
Information Content per bp:1.495
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets57.1 +/- 24.4bp
Average Position of motif in Background52.4 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTWMARG
GNCTATAAAAGG
 A C G T A C G T T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTTTTWMARG
CGGTTTCAAA--
 A C G T A C G T T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTTTTWMARG
--TTGACAGC
 T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTTTWMARG
-TTTTCCA--
 T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTTTWMARG
-ATTTGAATT
 T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTTTWMARG-----
GTATAAAAGGCGGGG
 T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTTTWMARG-----
GTATAAAAGGCGGGG
 T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTWMARG-----
GGATTGACAGGTCNTT
 A C G T T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTWMARG-----
GTATTGACAGGTNNTT
 A C G T T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTTTWMARG---
CCGTATTATAAACAA
 A C G T A C G T T A C G C A G T C A G T G C A T C G A T C G T A T G C A G C T A T C A G T C A G A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A