Information for 6-CAGGCCAAAGGTC (Motif 10)

T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C
Reverse Opposite:
A T C G C T G A T A G C G A T C G A C T A C G T A C G T A C T G C A T G A T G C A G T C G A C T A C T G
p-value:1e-21
log p-value:-4.927e+01
Information Content per bp:1.643
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.1 +/- 22.1bp
Average Position of motif in Background37.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
TAGGGCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
GAGGTCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
GAGGTCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCAAAGGTC-
GTAGGGCAAAGGTCA
 A C G T T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCAAAGGTC-
AGAGTCCAAAGTCCA
 A C G T T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CAGGCCAAAGGTC---
AAAGGTCAAAGGTCAAC
 A C G T T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
GGGGTCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
GGGGTCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CAGGCCAAAGGTC-
TGGGGCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXRB/MA0855.1/Jaspar

Match Rank:10
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CAGGCCAAAGGTC-
GGGGTCAAAGGTCA
 T G A C C G T A C T A G T A C G G T A C T A G C G T C A T G C A C G T A C T A G A T C G G A C T T A G C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A