Information for 7-GGGATTTCGCTGA (Motif 9)

A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A C T G A G T C A C T G G T C A G T C A C G T A A C G T A G T C A G T C G T A C
p-value:1e-6
log p-value:-1.492e+01
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 23.3bp
Average Position of motif in Background50.3 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGATTTCGCTGA
NGGGGATTTCCC---
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGATTTCGCTGA-
---AATTTGCTGAC
 A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGATTTCGCTGA--
---AAAATGCTGACT
 A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGATTTCGCTGA
AGGGGATTCCCCT--
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGCTGA
GGGAATTTCC----
 A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGATTTCGCTGA
AGGGGATTCCCCT--
 A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGCTGA
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGATTTCGCTGA
GGGGATTTCC----
 A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGATTTCGCTGA----
--AAAWWTGCTGACWWD
 A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGATTTCGCTGA-----
---AAANTGCTGACTNAG
 A C T G A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G