Information for 6-KTTTGTTGCWCTG (Motif 8)

A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G
Reverse Opposite:
A G T C C G T A T A C G C G A T A T C G A G T C C T G A C G T A A T G C G T C A G T C A T C G A T G A C
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.641
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif867.0
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets68.8 +/- 18.1bp
Average Position of motif in Background51.9 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KTTTGTTGCWCTG----
--TWGHWACAWTGTWDC
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:KTTTGTTGCWCTG-
--CTGTTGCTAGGS
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KTTTGTTGCWCTG----
--YDGHTACAWTGTADC
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KTTTGTTGCWCTG
-NTTGATACATT-
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:KTTTGTTGCWCTG---
-NCCGTTGCTANGNGN
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KTTTGTTGCWCTG---
-NNCGTTGCTATGGNN
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:KTTTGTTGCWCTG---
-NNTCCTGCTGTGNNN
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:KTTTGTTGCWCTG
-ATTGTT------
 A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---KTTTGTTGCWCTG-------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----KTTTGTTGCWCTG
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A T C G G A C T G A C T T C A G A T G C C G T A A T G C C G A T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T