Information for 18-TCTCCTGATTTAGGGC (Motif 37)

A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C T G A C T G C G T A A C T G C G T A
p-value:1e-2
log p-value:-5.018e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets0.0 +/- 0.0bp
Average Position of motif in Background64.4 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC-
-----TGATTTATGGCC
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC-
----NTGATTTATGGCC
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC
-----TGATTTATGGC
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC-
-----TGATTTATGGCC
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC-
-----DGWTTTATGRCN
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCTCCTGATTTAGGGC-
-----TGATTRATGGCY
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTCCTGATTTAGGGC
TATCATAATTAAGGA-
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCTCCTGATTTAGGGC
-----TGATTGATGA-
 A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTCCTGATTTAGGGC
AAANTGCTGACTNAG---
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCTCCTGATTTAGGGC
NAAAANTGCTGACTCAGC--
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T