Information for 12-GTAAATGGAT (Motif 29)

A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.986e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background51.3 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GTAAATGGAT---
ACTATGAATGAATGAT
A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTAAATGGAT
GCTAAACGGT-
A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAATGGAT
GTTAATGGCC
A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAAATGGAT--
GWAAYHTGAKMC
A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAATGGAT--
GTAATCDGATTA
A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAAATGGAT---
AAAAAATCGATAAT
A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAAATGGAT
GCTAATTGCT-
A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTAAATGGAT---
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTAAATGGAT---
AAAAAATCGATAAT
A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTAAATGGAT---
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G