Information for 21-GGTAACACTCCAC (Motif 24)

A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 31.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GGTAACACTCCAC
-------ATCCAC
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGTAACACTCCAC
---RSCACTYRAG
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGTAACACTCCAC
---NSCACTYVAV
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTAACACTCCAC
---ATCACCCCAT
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Hnf4a/MA0114.3/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTAACACTCCAC-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTAACACTCCAC
--MRSCACTYAA-
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGTAACACTCCAC
--AASCACTCAA-
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGTAACACTCCAC
----ACATTCCA-
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTAACACTCCAC
---ATCACCCCAT
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTAACACTCCAC
---ATCACCCCAC
 A C T G A C T G A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C