Information for 4-CGAAATCCTTYTWTTG (Motif 14)

A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
Reverse Opposite:
G T A C G C T A C T G A C G T A T G C A C T G A C T G A C T G A A C T G T A C G C G T A A C G T A G C T G A C T G A T C T A C G
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.605
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif128.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets54.0 +/- 32.6bp
Average Position of motif in Background50.5 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGAAATCCTTYTWTTG
--TAATCCCN------
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGAAATCCTTYTWTTG
CNATAATCCGNTTNT--
 A C G T A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGAAATCCTTYTWTTG
NYTAATCCYB------
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGAAATCCTTYTWTTG
NTAGTTAATCCCCTTAN--
 A C G T A C G T A C G T A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGAAATCCTTYTWTTG
NTTGTTAATCCCTCTNN--
 A C G T A C G T A C G T A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAAATCCTTYTWTTG---
--NNNTCCTTTGTTCTNNN
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGAAATCCTTYTWTTG---
---ANTCCTTTGTCTNNNN
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGAAATCCTTYTWTTG
GATAATTAATCCCTCTT---
 A C G T A C G T A C G T A C G T A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGAAATCCTTYTWTTG---
--TNNTCCTTTGTTCTNNT
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGAAATCCTTYTWTTG
CTTAATCCC-------
 A G T C C A T G C G T A C T G A G T C A C G A T A G T C A G T C G A C T A G C T A G C T A C G T C G A T A G C T C A G T C A T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T