Information for 10-AHKADAGWAAGAC (Motif 13)

G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
Reverse Opposite:
C T A G A G C T A T G C G C A T C A G T C G T A A G T C G A C T G T A C A C G T G T A C C G T A A C G T
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.574
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif466.7
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets57.8 +/- 17.2bp
Average Position of motif in Background52.2 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AHKADAGWAAGAC--
AAACAGACAAAGGAAT
 A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AHKADAGWAAGAC
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AHKADAGWAAGAC
TATAGATCAAAGGAAAA-
 A C G T A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AHKADAGWAAGAC
ATTAAA-------
 G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AHKADAGWAAGAC
NANTATTATAATTNNN-
 A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AHKADAGWAAGAC
ACTATAAATAGA-
 G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AHKADAGWAAGAC
TATAGATCAAAGGAAAA-
 A C G T A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AHKADAGWAAGAC
AAAGATCAAAGGAA---
 A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----AHKADAGWAAGAC
GCTAATTATAATTATC-
 A C G T A C G T A C G T A C G T G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AHKADAGWAAGAC-
--GAAACTGAAACT
 G T C A G C A T A C T G T G C A C A T G C G T A A C T G C G A T G C T A C G T A T A C G C T G A G A T C A C G T
A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T