Information for 1-TGCATGTCTCTGGGGT (Motif 1)

A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
Reverse Opposite:
C G T A A G T C A G T C A G T C G T A C C T G A A T C G G T C A A C T G G T C A G T A C G T C A A G C T A T C G A T G C G T C A
p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.672
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif38.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets30.9 +/- 19.0bp
Average Position of motif in Background55.0 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT
----NGTCCCNNGGGA
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
A C G T A C G T A C G T A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

EBF1/MA0154.3/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCATGTCTCTGGGGT--
----ANTCCCTNGGGAAT
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT
------WDNCTGGGCA
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT
----GTCCCCAGGGGA
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:TGCATGTCTCTGGGGT---
----RGSMTBCTGGGAAAT
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:6
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT-
-GTAGGTCACTGGGTCA
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:TGCATGTCTCTGGGGT--
-------TTCTTGGAAAN
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

MZF1/MA0056.1/Jaspar

Match Rank:8
Score:0.47
Offset:10
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT
----------TGGGGA
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT
------GGTCTGGCAT
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TGCATGTCTCTGGGGT--
---ACCACTCTCGGTCAC
 A C G T A T C G A T G C C T G A A C G T A C T G A C G T G T A C A C G T A T G C A G C T A C T G C T A G C T A G T A C G C G A T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C