Information for 3-TTGCMTTGTTTCTTTT (Motif 7)

A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A G T C A C G T A C A T G C G T A C G T A C G T A G T A C C G T A G T C A C A G T A C T G G T A C C G T A C G T A
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.787
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 20.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGCMTTGTTTCTTTT
ANNTCCATTGTTCNNN--
 A C G T A C G T A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGCMTTGTTTCTTTT
---GAATGTTTGTTT-
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGCMTTGTTTCTTTT
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGCMTTGTTTCTTTT
NNATNAATTGTTTNN---
 A C G T A C G T A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTGCMTTGTTTCTTTT--
---CTTTGTTTACTTTTN
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TTGCMTTGTTTCTTTT
------TGTTTATTT-
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGCMTTGTTTCTTTT
ANTCCTTTGTCTNNNN-
 A C G T A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGCMTTGTTTCTTTT
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTGCMTTGTTTCTTTT
----TTTGTTTACTTA
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTGCMTTGTTTCTTTT
----ATTGTTTAN---
 A C G T A C G T A C T G G T A C G T C A A C G T A C G T A C T G C G A T C G A T G C A T G A T C G C A T A C G T A C G T C G A T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T