Information for 2-AGCCTCGTGAGGG (Motif 3)

C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C G C A T G A T C C T G A G T A C C T A G G T C A A C T G A C T G A T G C A C G T
p-value:1e-14
log p-value:-3.442e+01
Information Content per bp:1.768
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 25.1bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS1/MA0735.1/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCTCGTGAGGG----
-GCTTCGTGGGGGGTCT
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

GLIS3/MA0737.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCCTCGTGAGGG---
--CTTCGTGGGGGGTC
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCCTCGTGAGGG
--NCACGTGACN-
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCTCGTGAGGG
-GCCACGTG----
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCCTCGTGAGGG
-GCCACGTGT---
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCCTCGTGAGGG
-NCCACGTG----
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGCCTCGTGAGGG--------
-GCCASCAGGGGGCGCYVNNG
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCCTCGTGAGGG
-KCCACGTGAC--
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCCTCGTGAGGG
-GGCACGTGCC--
 C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGCCTCGTGAGGG-
TAAGCCACTTGAAATT
 A C G T A C G T C G T A A T C G G T A C A G T C A C G T G A T C A C T G G A C T C T A G C G T A C T A G A T C G A C T G A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T