Information for 9-CTACAAAGTT (Motif 28)

G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
Reverse Opposite:
C G T A T C G A A T G C A C G T A G C T A C G T A C T G A C G T C T G A C T A G
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.827
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets47.7 +/- 32.2bp
Average Position of motif in Background50.3 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTACAAAGTT
--ACAAAG--
 G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTACAAAGTT--
YDGHTACAWTGTADC
 A C G T A C G T A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTACAAAGTT----
GHWACAWTGTWDCWA
 A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T A C G T A C G T A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTACAAAGTT----
--ACAAAGGNBCCT
 G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTACAAAGTT
VRRACAAWGG-
 A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTACAAAGTT
-RACAAWGG-
 G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACAAAGTT
-AACAAAGG-
 G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTACAAAGTT
GGAACAAAGR-
 A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTACAAAGTT--
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T A C G T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTACAAAGTT
ACATCAAAGG-
 A C G T G A T C A G C T G T C A G T A C G T C A T C G A C G T A T A C G A C G T C G A T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T