Information for 19-CACTGGCATT (Motif 34)

A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A G T C C T G A A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.573e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 14.0bp
Average Position of motif in Background67.1 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CACTGGCATT--
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SOX21/MA0866.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACTGGCATT---
AACACTACCATTGTT
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Sox1/MA0870.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCATT---
AACAATAACATTGTT
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCATT---
TTGAATGAAATTCGA
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

SOX4/MA0867.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTGGCATT----
AACACTGCAATTGTTC
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACTGGCATT---
AACACTGAAATTGTT
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTGGCATT-
GTCCGCCATTA
 A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACTGGCATT
GGTTGGCAT-
 A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTGGCATT
CCAACTGCCA--
 A C G T A C G T A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACTGGCATT
--TTGGCA--
 A G T C C G T A A G T C A G C T A C T G C T A G A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T