Information for 6-CACCTTTGGT (Motif 13)

G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T
Reverse Opposite:
C G T A A G T C G T A C C G T A G T C A C G T A A C T G A C T G C G A T A C T G
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.861
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif77.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets47.9 +/- 22.0bp
Average Position of motif in Background47.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CACCTTTGGT
--CCTTTGTT
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACCTTTGGT---
TCACCTCTGGGCAG
 A C G T G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CACCTTTGGT--
--GCTGTGGTTT
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CACCTTTGGT
--CCWTTGTY
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CACCTTTGGT--
--CCTTTGTTTT
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTTGGT--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACCTTTGGT--
--CCTTTGATGT
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACCTTTGGT---
---CTGTGGTTTN
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACCTTTGGT--
CCACCTGTTGCAT
 A C G T G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACCTTTGGT---
-NNHTGTGGTTWN
 G T A C C G T A G T A C G T A C A C G T A C G T A C G T A C T G A C T G C G A T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G