Information for 4-TGAGAAATTTGGGATA (Motif 12)

A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
Reverse Opposite:
A C G T C G T A A G C T A G T C A G T C G T A C C G T A C G T A C G T A A G C T A C G T A C G T G T A C C G A T A G T C C G T A
p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.916
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 17.9bp
Average Position of motif in Background41.4 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGAGAAATTTGGGATA--
-GANTATTATGGGATGGA
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A A C G T A C G T
A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGAGAAATTTGGGATA
CSTGGGAAAD--------
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGAGAAATTTGGGATA-
--RGSMTBCTGGGAAAT
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TGAGAAATTTGGGATA-
---CAAATTCCGGAACC
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A A C G T
A C G T A C G T A C G T G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:TGAGAAATTTGGGATA-----
----TATTATGGGATGGATAA
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

HOXA5/MA0158.1/Jaspar

Match Rank:6
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TGAGAAATTTGGGATA
-----AATTAGTG---
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:TGAGAAATTTGGGATA
TAAGTAATTAGTTATA
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.48
Offset:-7
Orientation:forward strand
Alignment:-------TGAGAAATTTGGGATA
GAAAAGGTGTGAAAATT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TGAGAAATTTGGGATA
ACCGTGACTAATTNN-----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A A C G T A C G T A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGAGAAATTTGGGATA
GTACTAATTAGTGGCG
 A C G T A C T G C G T A A C T G C G T A C G T A C T G A A C G T A C G T A C G T C A T G A C T G A C T G T C G A C G A T C G T A
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G