Information for 5-TAACTAGCTA (Motif 11)

C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A
Reverse Opposite:
G A C T C G T A A C T G A G T C G A C T C T G A C A T G G C A T C G A T G C T A
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.706
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif7.11%
Number of Background Sequences with motif552.9
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets48.1 +/- 30.2bp
Average Position of motif in Background49.1 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0074.1_Hoxd1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TAACTAGCTA--
TAAACTAATTAGCTGTA
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PH0045.1_Hoxa1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAACTAGCTA--
ACGGTAATTAGCTCAG
 A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G

PH0154.1_Prrx1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TAACTAGCTA--
GTAACTAATTAACTACT
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAACTAGCTA--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0032.1_Evx2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAACTAGCTA--
ANCGCTAATTAGCGGTN
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0001.1_Alx3/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TAACTAGCTA--
TAAACTAATTAGCTGAG
 A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T A C G T
C G A T T C G A G C T A T C G A G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G G A T C A G C T T A C G G C T A T C A G

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAACTAGCTA
NTAATGAGCT-
 A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAACTAGCTA
TTAATTAG---
 A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------TAACTAGCTA-
NTTCGCTAATTAGCTNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TAACTAGCTA
-----NGCTN
 C G A T G C T A C G T A G T A C G A C T C T G A T C A G G T A C A C G T C T G A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G