Information for 16-TRAMGGTACCKTYAGG (Motif 32)

A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C T G A C G T A G T C A C T A G A C T G A G C T C G T A G T A C A G T C A C G T A C G T A G C T C G T A
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.882
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.6 +/- 5.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TRAMGGTACCKTYAGG
TTCNAAGTACTTNNNNN
 A C G T A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.51
Offset:5
Orientation:forward strand
Alignment:TRAMGGTACCKTYAGG-
-----ATGCCCTGAGGC
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TRAMGGTACCKTYAGG-
-----WTGSCCTSAGGS
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TRAMGGTACCKTYAGG---
---GGGTTACTANAGGTCA
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:TRAMGGTACCKTYAGG---
NNGAGGTTACTNNAGGTCA
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TRAMGGTACCKTYAGG
NNNNTAACGGTTNNNAN---
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TRAMGGTACCKTYAGG---
----GGTCANYTGAGGWCA
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TRAMGGTACCKTYAGG
ATTTACAGTAGCAAAA--
 A C G T A C G T A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:TRAMGGTACCKTYAGG--
------TGCCCTNGGGCA
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:TRAMGGTACCKTYAGG---
-----NTGCCCTAGGGCAA
 A C G T C T G A C G T A G T C A A C T G A C T G A C G T C T G A G T A C A G T C A C G T A C G T A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A