Information for 9-TGTGTGTTCA (Motif 27)

A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A
Reverse Opposite:
C A G T T A C G G T C A G T C A T G A C C G T A G T A C C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.826
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif409.7
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets47.6 +/- 29.1bp
Average Position of motif in Background49.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGTTCA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTGTGTTCA-
TGTGGATTNNN
 A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTTCA----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGTTCA
CGTGGGTGGTCC
 A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTTCA-
NNHTGTGGTTWN
 A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGTTCA-
CAGTGTGGTCGC
 A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTTCA----
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTGTGTTCA---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTGTGTTCA----
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGTTCA
NNTGTGGATTSS
 A C G T A C G T A C G T T C A G A C G T A C T G C G A T A C T G C A G T A C G T A T G C G T C A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G